Package: survivalsurrogate 1.1
survivalsurrogate: Evaluate a Longitudinal Surrogate with a Censored Outcome
Provides influence function-based methods to evaluate a longitudinal surrogate marker in a censored time-to-event outcome setting, with plug-in and targeted maximum likelihood estimation options. Details are described in: Agniel D and Parast L (2025). "Robust Evaluation of Longitudinal Surrogate Markers with Censored Data." Journal of the Royal Statistical Society: Series B <doi:10.1093/jrsssb/qkae119>. A tutorial for this package can be found at <https://www.laylaparast.com/survivalsurrogate> and a Shiny App implementing the package can be found at <https://parastlab.shinyapps.io/survivalsurrogateApp/>.
Authors:
survivalsurrogate_1.1.tar.gz
survivalsurrogate_1.1.zip(r-4.7-any)survivalsurrogate_1.1.zip(r-4.6-any)survivalsurrogate_1.1.zip(r-4.5-any)
survivalsurrogate_1.1.tgz(r-4.6-any)survivalsurrogate_1.1.tgz(r-4.5-any)
survivalsurrogate_1.1.tar.gz(r-4.7-any)survivalsurrogate_1.1.tar.gz(r-4.6-any)
survivalsurrogate_1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
survivalsurrogate/json (API)
| # Install 'survivalsurrogate' in R: |
| install.packages('survivalsurrogate', repos = c('https://laylaparast.r-universe.dev', 'https://cloud.r-project.org')) |
- exampledata - Example dataset
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:a71027dcd6. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 150 | ||
| source / vignettes | OK | 169 | ||
| linux-release-x86_64 | OK | 134 | ||
| macos-release-arm64 | OK | 89 | ||
| macos-oldrel-arm64 | OK | 87 | ||
| windows-devel | OK | 96 | ||
| windows-release | OK | 97 | ||
| windows-oldrel | OK | 98 | ||
| wasm-release | OK | 108 |
Exports:estimate_Rplugin_deltaplugin_delta_stmle_deltatmle_delta_s
Dependencies:backportscheckmateclicodetoolsdata.tabledigestdplyrevaluatefuturefuture.applygenericsglobalsgluelgrlifecyclelistenvmagrittrmiraimlbenchmlr3mlr3measuresmlr3miscnanonextpalmerpenguinsparadoxparallellypillarpkgconfigPRROCpurrrR6rBeta2009rlangrpartSparseMtibbletidyselectutf8uuidvctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Estimates the proportion of the treatment effect explained | estimate_R |
| Example dataset | exampledata |
| Treatment effect estimation using plug-in estimator | plugin_delta |
| Residual treatment effect estimation using the plug-in estimator | plugin_delta_s |
| Treatment effect estimation using TMLE | tmle_delta |
| Residual treatment effect estimation using TMLE | tmle_delta_s |
